Simpleaffy bioconductor
WebbVery simple high level analysis of Affymetrix data Bioconductor version: 3.9 Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple things with it, such as t-tests, fold changes and the like. Makes heavy use of the affy library. Webb13 juli 2024 · 知乎,中文互联网高质量的问答社区和创作者聚集的原创内容平台,于 2011 年 1 月正式上线,以「让人们更好的分享知识、经验和见解,找到自己的解答」为品牌使命。知乎凭借认真、专业、友善的社区氛围、独特的产品机制以及结构化和易获得的优质内容,聚集了中文互联网科技、商业、影视 ...
Simpleaffy bioconductor
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WebbVery simple high level analysis of Affymetrix data. Bioconductor version: Release (3.1) Provides high level functions for reading Affy .CEL files, phenotypic data, and then … Webb28 juli 2024 · Bioconductor version 3.13 (BiocManager 1.30.16), R 4.1.0 (2024-05-18) Installing package(s) 'destiny' Installation paths not writeable, unable to update packages
WebbOn 9/24/2012 5:14 PM, SAIC [guest] wrote: > Hi, > > I am trying to perform QC on a Mouse Gene 1.0 ST Array using simpleaffy(). However, simpleaffy is not recognizing the cdf file associated with the array. According to the instructions in the simpleaffy() vignette, the cdf file has been renamed to have an extension of .qcdef and has been placed in the R … WebbVery simple high level analysis of Affymetrix data. Bioconductor version: 3.9. Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple …
Webbsimpleaffy Very simple high level analysis of Affymetrix data Bioconductor version: 3.0 Provides high level functions for reading Affy .CEL files, phenotypic data, and then … WebbIn this design, and if we use log_2 (R/G), testing A == D is straightforward since A and D are connected and we can express D - A as the sum of the log ratios in the three arrays. But suppose we use some non-linear normalization of the data, such as loess as in Yang et al. 2002 (package marrayNorm) or the variance stabilization method of Huber ...
Webb27 okt. 2024 · simpleaffy: Very simple high level analysis of Affymetrix data Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple …
Webb8 nov. 2024 · all.present: Filter by PMA call all.present.in.group: Filter by PMA call bg.correct.sa: Simpleaffy Implementation of Mas5 Background Correction call.exprs: Generate Expression Summaries for Affymetrix Data detection.p.val: Calculate Detection p-values get.annotation: Get annotation data for a gene list get.array.indices: Find arrays in … dysterra create serverWebb8 nov. 2024 · Bioconductor / simpleaffy / read.affy: Read a Set of .CEL Files and Phenotypic Data read.affy: Read a Set of .CEL Files and Phenotypic Data In simpleaffy: Very simple high level analysis of Affymetrix data Description Usage Arguments Value Author (s) References See Also Examples View source: R/read.affy.R Description dyste williams mnWebbVery simple high level analysis of Affymetrix data Bioconductor version: Release (3.5) Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple things... dyst fairy tailWebbBioConductor methods normalization and visualization of microarray data r-bioc-biobase (2.42.0-1) base functions for Bioconductor r-bioc-biocgenerics (0.28.0-2) generic functions for Bioconductor r-bioc-biocinstaller (1.32.1-1) Install/Update Bioconductor and CRAN Packages r-bioc-biocparallel (1.16.6-1) BioConductor facilities for parallel ... dyster hos puhWebbR version and packages problems. R version and packages problems. 0. 5.3 years ago. onemore100iq 20. I am trying to work with project that analyzed with simpleaffy package. I always get this strange message with whatever R version I change to. dysthati following cva icd 10http://bioconductor.jp/packages/3.9/bioc/html/simpleaffy.html dysthanasia exampleWebbVery simple high level analysis of Affymetrix data Bioconductor version: 2.10 Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple … dystheism definition